miRBase entry: ppt-MIR1033d

Stem-loop ppt-MIR1033d


Accession
MI0005991
Description
Physcomitrella patens ppt-MIR1033d precursor miRNA
Gene family
MIPF0000385; MIR1033


Sequence

aaguauuuacaaggcuggcagucgcauugggaauguccaugacgaucugucaacauuucagguuauguUGACGGGUCGUGAUGGGCACUcucacugucucaugcugaugaugauucgug
................(((((..(((.(((((.(((((((.(((((((((((((((........))))))))))))))).))))))).))))).)))..).)))).((((....)))).

Structure
aaguauuuacaaggcu    - uc   u     a       g               uuc 
                ggca g  gca uggga uguccau acgaucugucaacau   a
                |||| |  ||| ||||| ||||||| |||||||||||||||    
                ucgu c  ugu acucU ACGGGUA UGCUGGGCAGUugua   g
--gugcuuaguaguag    a uc   c     C       G               uug 


Annotation confidence Not enough data
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Genome context
Chr13: 10349512-10349630 [-]

Database links

Mature ppt-miR1033d

Accession MIMAT0005139
Description Physcomitrella patens ppt-miR1033d mature miRNA
Sequence 69 - UGACGGGUCGUGAUGGGCACU - 89
Evidence experimental
454 [1]

References

  1. PubMed ID: 17601824
    Common functions for diverse small RNAs of land plants
    "Axtell MJ, Snyder JA, Bartel DP"
    "Plant Cell (2007) 19:1750-1769