Stem-loop ppt-MIR1033c

Accession

MI0005990

Description

Physcomitrella patens ppt-MIR1033c precursor miRNA

Gene family

MIPF0000385; MIR1033

Sequence

gagaugaagauggaauugaugggauguugggcaugcccaacacgaucugucaacauucuauguuauauUGACGGGUCGUGAUGGGCACUcucaauguccacuucaugauaauauaacuc
................(((.(((((((((((..((((((.(((((((((((((.((........)).))))))))))))).))))))..)))))))))).).)))..............

Structure

gagaugaagauggaau   u -          ca      a             c  ucu 
                uga g ggauguuggg  ugccca cacgaucugucaa au   a
                ||| | ||||||||||  |||||| ||||||||||||| ||    
                acu c ccuguaacuc  ACGGGU GUGCUGGGCAGUu ua   u
--cucaauauaauagu   u a          UC      A             a  uug 

Annotation confidence Not enough data

Genome context

Chr15: 3957430-3957548 [-]

Mature ppt-miR1033c

• Accession: MIMAT0005138
• Description: Physcomitrella patens ppt-miR1033c mature miRNA
• Sequence: 69 - UGACGGGUCGUGAUGGGCACU - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769