Stem-loop ppt-MIR1033b

Accession

MI0005989

Description

Physcomitrella patens ppt-MIR1033b precursor miRNA

Gene family

MIPF0000385; MIR1033

Sequence

gugaccaagauggagaugaugggauguugggcaugcucaacacgaucugucaacauucuagaguauauUGACGGGUCGUGAUGGGCACUcucaauguccacuucaugguuuugugacgu
((.((.(((((.(.((.....((((((((((..((((((.(((((((((((((.((........)).))))))))))))).))))))..))))))))))...)).).))))))).))..

Structure

--  g  c     g a  ugaug          ca      a             c  ucu 
  gu ac aagau g ga     ggauguuggg  ugcuca cacgaucugucaa au   a
  || || ||||| | ||     ||||||||||  |||||| ||||||||||||| ||    
  ca ug uuuug u cu     ccuguaacuc  ACGGGU GUGCUGGGCAGUu ua   g
ug  g  -     g a  --uca          UC      A             a  uga 

Annotation confidence Not enough data

Genome context

Chr09: 8698056-8698174 [+]

Mature ppt-miR1033b

• Accession: MIMAT0005137
• Description: Physcomitrella patens ppt-miR1033b mature miRNA
• Sequence: 69 - UGACGGGUCGUGAUGGGCACU - 89
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769