Stem-loop ppt-MIR1032

Accession

MI0005987

Description

Physcomitrella patens ppt-MIR1032 precursor miRNA

Sequence

acuagcaagagccaugccucugcccaggcAGGUGACUGCCUGGAAUUGGGcauaaaugcccaauuggacucccaagugcccaauuccaggcaagccccugucugggcaggagcaugauuucuuccag
....(.(((((.(((((.((((((((((((((.(..(((((((((((((((((..........((((....)))))))))))))))))))))..).)))))))))))))).)))))..))))).)..

Structure

acua c     -c     c              U AC                 aaaugcccaa    a 
    g aagag  caugc ucugcccaggcAGG G  UGCCUGGAAUUGGGcau          uugg c
    | |||||  ||||| |||||||||||||| |  |||||||||||||||||          ||||  
    c uucuu  guacg ggacgggucugucc c  acggaccuuaacccgug          aacc u
--ga c     ua     a              c ga                 ----------    c 

Annotation confidence Not enough data

Genome context

Chr19: 443502-443628 [-]

Mature ppt-miR1032

• Accession: MIMAT0005135
• Description: Physcomitrella patens ppt-miR1032 mature miRNA
• Sequence: 30 - AGGUGACUGCCUGGAAUUGGG - 50
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769