Stem-loop ppt-MIR477e

Accession

MI0005919

Description

Physcomitrella patens ppt-MIR477e precursor miRNA

Gene family

MIPF0000216; MIR477

Literature search

1 open access papers mention ppt-MIR477e
(11 sentences)

Sequence

gaugagaagauuccgaaaggcgguugcuuaucuCUCUCCCUCAAAGGCUUCCAacaucagguguagaagccuugcuagaagccuuugugggagagggggaaacaaacgccuugcauuauugccguuc
................((((((..((....((((((((((.((((((((((...((..((((......))))))...)))))))))).))))))))))....))..))))))(((....))).....

Structure

gaugagaagauuccga      gu  cuua          U          CAa  uc    gu 
                aaggcg  ug    ucuCUCUCCC CAAAGGCUUC   ca  aggu  a
                ||||||  ||    |||||||||| ||||||||||   ||  ||||   
                uuccgc  ac    ggggagaggg guuuccgaag   gu  uccg  g
-cuugccguuauuacg      aa  aaag          u          auc  --    aa 

Annotation confidence Not enough data

Genome context

Chr06: 11394397-11394523 [-]

Mature ppt-miR477e

• Accession: MIMAT0005052
• Description: Physcomitrella patens ppt-miR477e mature miRNA
• Sequence: 34 - CUCUCCCUCAAAGGCUUCCA - 53
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 17601824
   Common functions for diverse small RNAs of land plants
   "Axtell MJ, Snyder JA, Bartel DP"
   "Plant Cell (2007) 19:1750-1769