miRBase entry: dme-mir-1010

Stem-loop dme-mir-1010


Accession
MI0005871
Description
Drosophila melanogaster dme-mir-1010 precursor miRNA
Gene family
MIPF0000866; mir-1010

Literature search
2 open access papers mention dme-mir-1010
(2 sentences)

Sequence

16477 reads, 412 reads per million, 49 experiments
GUAAGUGGUGUAGAUGAAACAaauuuaccaacaauuuuguuggauugUUUCACCUAUCGUUCCAUUUGCAG
((((((((.((((.((((((((.....((((((....)))))).)))))))).))))....))))))))..

Structure
--        ---U    A        auuua      a 
  GUAAGUGG    GUAG UGAAACAa     ccaaca u
  ||||||||    |||| ||||||||     ||||||  
  CGUUUACC    UAUC ACUUUguu     gguugu u
GA        UUGC    C        ----a      u 


Annotation confidence High
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Genome context
chr3R: 22292879-22292949 [+]

Database links

Mature dme-miR-1010-3p

Accession MIMAT0005023
Description Drosophila melanogaster dme-miR-1010-3p mature miRNA
Sequence 48 - UUUCACCUAUCGUUCCAUUUGCAG - 71
Evidence experimental
454 [1]
Database links
Predicted targets

Mature dme-miR-1010-5p

Accession MIMAT0020905
Description Drosophila melanogaster dme-miR-1010-5p mature miRNA
Sequence 1 - GUAAGUGGUGUAGAUGAAACA - 21
Evidence not_experimental
Database links

References

  1. PubMed ID: 17589500
    Intronic microRNA precursors that bypass Drosha processing
    "Ruby JG, Jan CH, Bartel DP"
    "Nature (2007) 448:83-86