miRBase entry: dme-mir-991

Stem-loop dme-mir-991


Accession
MI0005851
Description
Drosophila melanogaster dme-mir-991 precursor miRNA
Gene family
MIPF0000957; mir-991

Literature search
1 open access papers mention dme-mir-991
(2 sentences)

Sequence

1746 reads, 96 reads per million, 40 experiments
uaucacugcaguuucaggcuUUUCCCAACUACACCUAUUAAUacauauuuuaacguccuaUUAAAGUUGUAGUUUGGAAAGUuuugguuuugcauu
......(((((..(((((.((((((.(((((((.((.((((((...............)))))))).))))))).)))))).)))))..)))))..

Structure
uaucac     uu     c      C       C  A      cauauu 
      ugcag  ucagg uUUUCC AACUACA CU UUAAUa      u
      |||||  ||||| |||||| ||||||| || ||||||      u
      acguu  gguuu GAAAGG UUGAUGU GA AAUUau      a
----uu     uu     U      U       U  -      ccugca 


Annotation confidence High
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Genome context
chr2R: 20585200-20585295 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from dme-mir-991
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dme-miR-991-3p

Accession MIMAT0005509
Description Drosophila melanogaster dme-miR-991-3p mature miRNA
Sequence 61 - UUAAAGUUGUAGUUUGGAAAGU - 82
Evidence experimental
454 [1]
Database links
Predicted targets

Mature dme-miR-991-5p

Accession MIMAT0020890
Description Drosophila melanogaster dme-miR-991-5p mature miRNA
Sequence 21 - UUUCCCAACUACACCUAUUAAU - 42
Evidence not_experimental
Database links

References

  1. PubMed ID: 17989254
    Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
    "Genome Res (2007) 17:1850-1864