Stem-loop dme-mir-990

Accession

MI0005850

Description

Drosophila melanogaster dme-mir-990 precursor miRNA

Literature search

1 open access papers mention dme-mir-990
(1 sentences)

Sequence

5830 reads, 176 reads per million, 39 experiments

ucugcucugcgacAUUCACCGUUCUGAGUUGGCCccaagugcacguggGCCAGCUUUCAGCUUCGGUGCCAUuucaccccgagcac
..(((((.(.((....(((((..(((((((((((((........).))))))))..))))...))))).....)).)...))))).

Structure

uc     --u c  -cAUU     -UU    --        - aag 
  ugcuc   g ga     CACCG   CUGA  GUUGGCCc c   u
  |||||   | ||     |||||   ||||  |||||||| |    
  acgag   c cu     GUGGC   GACU  CGACCGgg g   g
-c     ccc a  uUACC     UUC    UU        u cac 

Annotation confidence High

Genome context

chr2R: 16895223-16895308 [-]

Mature dme-miR-990-5p

• Accession: MIMAT0005508
• Description: Drosophila melanogaster dme-miR-990-5p mature miRNA
• Sequence: 14 - AUUCACCGUUCUGAGUUGGCC - 34
• Evidence: experimental ; 454 [1]

Mature dme-miR-990-3p

• Accession: MIMAT0020889
• Description: Drosophila melanogaster dme-miR-990-3p mature miRNA
• Sequence: 49 - GCCAGCUUUCAGCUUCGGUGCCAU - 72
• Evidence: not_experimental

References

1. PubMed ID: 17989254
   Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
   "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
   "Genome Res (2007) 17:1850-1864