miRBase entry: dme-mir-iab-8

Stem-loop dme-mir-iab-8


Accession
MI0005805
Description
Drosophila melanogaster dme-mir-iab-8 precursor miRNA
Gene family
MIPF0000854; mir-iab-8


Sequence

8957 reads, 106 reads per million, 45 experiments
ucgugUUACGUAUACUGAAGGUAUACCGgauaggauacacucaGGAUACAUUCAGUAUACGUUUAcga
(((((..((((((((((((.((((.((.((..(....)..)).)))))).)))))))))))).)))))

Structure
     UU            G    A  G  ua g 
ucgug  ACGUAUACUGAA GUAU CC ga  g a
|||||  |||||||||||| |||| || ||  |  
agcAU  UGCAUAUGACUU CAUA GG cu  c u
     -U            A    -  a  ca a 


Annotation confidence High
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Genome context
chr3R: 16856275-16856342 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dme-mir-iab-8
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dme-miR-iab-8-5p

Accession MIMAT0005463
Description Drosophila melanogaster dme-miR-iab-8-5p mature miRNA
Sequence 6 - UUACGUAUACUGAAGGUAUACCG - 28
Evidence experimental
454 [1], in-situ [2]
Database links

Mature dme-miR-iab-8-3p

Accession MIMAT0005464
Description Drosophila melanogaster dme-miR-iab-8-3p mature miRNA
Sequence 44 - GGAUACAUUCAGUAUACGUUUA - 65
Evidence experimental
454 [1], in-situ [2]
Database links

References

  1. PubMed ID: 17989254
    Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    "Ruby JG, Stark A, Johnston WK, Kellis M, Bartel DP, Lai EC"
    "Genome Res (2007) 17:1850-1864

  2. PubMed ID: 18172160
    A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands
    "Stark A, Bushati N, Jan CH, Kheradpour P, Hodges E, Brennecke J, Bartel DP, Cohen SM, Kellis M"
    "Genes Dev (2008) 22:8-13