Stem-loop sequence hsa-mir-935

Accession

MI0005757 (change log)

Symbol

HGNC:MIR935

Description

Homo sapiens miR-935 stem-loop

Gene family

MIPF0000606; mir-935

Literature search

10 open access papers mention hsa-mir-935
(34 sentences)

Stem-loop

            gcg      a             ccc  c   caucc 
5' ggcgggggc   ggcggc guggcgggagcgg   cu ggc     u
   |||||||||   |||||| |||||||||||||   || |||      
3' ucgcccucg   ccgccg caucgccuucgcc   ga ccg     c
            ---      c             auu  c   ucugc 

Deep sequencing

6540 reads, 11.8 reads per million, 110 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCh38; GCA_000001405.15): chr19: 53982307-53982397 [+]
• Overlapping transcripts:

  sense

  OTTHUMT00000350639 ; ZNF813-002; intron 1

  OTTHUMT00000350638 ; ZNF813-001; intron 1

  OTTHUMT00000350640 ; ZNF813-003; intron 1

  ENST00000468450 ; ZNF813-002; intron 1

  ENST00000396403 ; ZNF813-001; intron 1

  ENST00000490956 ; ZNF813-003; intron 1

  ENST00000396421 ; ZNF813-201; intron 1

Database links

• EntrezGene:MIR935
• HGNC:MIR935
• RNAcentral:URS000075D91F_9606
• miRBase Tracker:MI0005757

Mature sequence hsa-miR-935

• Accession: MIMAT0004978
• Sequence: 56 - ccaguuaccgcuuccgcuaccgc - 78
• Deep sequencing: 6467 reads, 103 experiments
• Evidence: experimental; cloned [1]
• Database links:
  • RNAcentral:URS000033EBB8_9606
• Predicted targets:
  • TargetMiner:hsa-miR-935
  • TargetScanVert:hsa-miR-935
  • miRDB:hsa-miR-935
  • microrna.org:hsa-miR-935

References

1. PMID:17616659 "Patterns of known and novel small RNAs in human cervical cancer" Lui WO, Pourmand N, Patterson BK, Fire A Cancer Res. 67:6031-6043(2007).