miRBase entry: ame-mir-87-2

Stem-loop ame-mir-87-2


Accession
MI0005744
Description
Apis mellifera ame-mir-87-2 precursor miRNA
Gene family
MIPF0000152; mir-87


Sequence

uauaaagcauccgaacguuacgggcgggccugacucuuugcucugcccguaucuuuuuuuccacucuggGUGAGCAAAGUUUCAGGUGUguccgugacag
................((((((((((.((((((..((((((((.(((((.................)))))))))))))..)))))).))))))))))..

Structure
uauaaagcauccgaac          g      cu        u     uaucuuu 
                guuacgggcg gccuga  cuuugcuc gcccg       u
                |||||||||| ||||||  |||||||| |||||       u
                cagugccugU UGGACU  GAAACGAG UGggu       u
--------------ga          G      UU        -     cucaccu 


Annotation confidence Not enough data
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Genome context
CM000064.5: 8468635-8468734 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ame-mir-87-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ame-miR-87-3p

Accession MIMAT0004434
Description Apis mellifera ame-miR-87-3p mature miRNA
Sequence 70 - GUGAGCAAAGUUUCAGGUGU - 89
Evidence experimental
array [1], Illumina [2]

References

  1. PubMed ID: 17543122
    Computational and transcriptional evidence for microRNAs in the honey bee genome
    Weaver DB, Anzola JM, Evans JD, Reid JG, Reese JT, Childs KL, Zdobnov EM, Samanta MP, Miller J, Elsik CG
    Genome Biol (2007) 8:R97

  2. PubMed ID: 22409512
    Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome
    "Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y"
    "Genes Brain Behav (2012) 11:660-670