Stem-loop gra-MIR157a

Accession

MI0005642

Description

Gossypium raimondii gra-MIR157a precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

2 open access papers mention gra-MIR157a
(6 sentences)

Sequence

guugUUGACAGAAGAUAGAGAGCACagaugauggugugcaauuaggagucuugaagcaaugcaucccacuccuuugugcucuuuaugcuucugucaucacc
..((.(((((((((((((((((((((((.(((((.(((((.(((((...))))).....))))).))).)).)))))))))))))).))))))))).))..

Structure

gu  U         -              u  -   u     ----a     a 
  ug UGACAGAAG AUAGAGAGCACaga ga ugg gugca     uuagg  
  || ||||||||| |||||||||||||| || ||| |||||     ||||| g
  ac acugucuuc uauuucucguguuu cu acc uacgu     aguuc  
cc  u         g              c  c   c     aacga     u 

Annotation confidence Not enough data

Genome context

chr6: 21468805-21468905 [-]

Mature gra-miR157a

• Accession: MIMAT0005810
• Description: Gossypium raimondii gra-miR157a mature miRNA
• Sequence: 5 - UUGACAGAAGAUAGAGAGCAC - 25
• Evidence: not_experimental

References

1. PubMed ID: 18603441
   Identification of micro-RNAs in cotton
   "Khan Barozai MY, Irfan M, Yousaf R, Ali I, Qaisar U, Maqbool A, Zahoor M, Rashid B, Hussnain T, Riazuddin S"
   "Plant Physiol Biochem (2008) 46:739-751