miRBase entry: ghr-MIR156c

Stem-loop ghr-MIR156c


Accession
MI0005640
Description
Gossypium hirsutum ghr-MIR156c precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
34 open access papers mention ghr-MIR156c
(142 sentences)

Sequence

ggUGUCAGAAGAGAGUGAGCACacaggguucuuuguagcaugcuugagccuuucaugcuagaagcuaugugugcucacccucuaucugucauccacu
((((.((((((((.(((((((((((.(((...((.(((((((...........))))))).))))).))))))))))).)))).)))).))))....

Structure
----    U    -    A           g   ucu  g       cuug 
    ggUG CAGA AGAG GUGAGCACaca ggu   uu uagcaug    a
    |||| |||| |||| ||||||||||| |||   || |||||||    g
    cuac gucu ucuc cacucgugugu ucg   aa aucguac    c
ucac    u    a    c           a   ---  g       uuuc 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ghr-miR156c

Accession MIMAT0005808
Description Gossypium hirsutum ghr-miR156c mature miRNA
Sequence 3 - UGUCAGAAGAGAGUGAGCAC - 22
Evidence not_experimental

References

  1. PubMed ID: 18603441
    Identification of micro-RNAs in cotton
    "Khan Barozai MY, Irfan M, Yousaf R, Ali I, Qaisar U, Maqbool A, Zahoor M, Rashid B, Hussnain T, Riazuddin S"
    "Plant Physiol Biochem (2008) 46:739-751