miRBase entry: mtr-MIR156i

Stem-loop mtr-MIR156i


Accession
MI0005626
Description
Medicago truncatula mtr-MIR156i precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
10 open access papers mention mtr-MIR156i
(77 sentences)

Sequence

gauauUGACAGAAGAGAGUGAGCACaugcugcagugauuguaugauagcauacaauucuuggugcgUGCUCACUUCUCUUUCUGUCAUCuuau
.....((((((((((((((((((((.(((((.((.(((((((((....)))))))))))))))).)))))))).)))).))))))))......

Structure
-gauau        -    -        a     c  u         a 
      UGACAGAA GAGA GUGAGCAC ugcug ag gauuguaug u
      |||||||| |||| |||||||| ||||| || |||||||||  
      ACUGUCUU CUCU CACUCGUg guggu uc uuaacauac a
uauuCU        U    U        c     -  -         g 


Annotation confidence Not enough data
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Genome context
chr4: 46126859-46126951 [-]

Database links

Mature mtr-miR156i-5p

Accession MIMAT0011112
Description Medicago truncatula mtr-miR156i-5p mature miRNA
Sequence 6 - UGACAGAAGAGAGUGAGCAC - 25
Evidence experimental
Illumina [2]

Mature mtr-miR156i-3p

Accession MIMAT0026733
Description Medicago truncatula mtr-miR156i-3p mature miRNA
Sequence 67 - UGCUCACUUCUCUUUCUGUCAUC - 89
Evidence experimental
Illumina [2]

References


  1. "Bonnet E"
    (2007) None:

  2. PubMed ID: 23572382
    microRNA profiling of root tissues and root forming explant cultures in Medicago truncatula
    "Eyles RP, Williams PH, Ohms SJ, Weiller GF, Ogilvie HA, Djordjevic MA, Imin N"
    "Planta (2013) 238:91-105