Stem-loop sequence mtr-MIR171d

AccessionMI0005619 (change log)
DescriptionMedicago truncatula miR171d stem-loop
Gene family MIPF0000030; MIR171_1
Literature search

8 open access papers mention mtr-MIR171d
(53 sentences)

Stem-loop 
   aa            c       c       aagugau       -    a   ag 
5'   ugagauauuggc ugguuca ucagacc       aaaccac uaag uac  u
     |||||||||||| ||||||| |||||||       ||||||| |||| |||   
3'   acucuauaaccg gccgagu aguuugg       uuuggug guuc aug  a
   uc            u       u       -----gu       u    -   uu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JCVI_Mt3.5.2) Overlapping transcripts
chr8: 20063684-20063788 [-]
intergenic
Database links

Mature sequence mtr-miR171d

Accession MIMAT0011105
Sequence

80 -  

ugauugagccgugccaauauc

 - 100

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Evidence experimental; 454 [2], Northern [2]

References

1
" Bonnet E Unpublished (2007).
2
PMID:19555436 "Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families" Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R New Phytol. 184:85-98(2009).