Stem-loop mtr-MIR160d

Accession

MI0005615

Description

Medicago truncatula mtr-MIR160d precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

5 open access papers mention mtr-MIR160d
(16 sentences)

Sequence

uagugUGCCUGGCUCCCUGUAUGCCAuuuguagaguccaucacgacagugaugaacuuagugaauggcguacucggagucaugcaugcugu
((((((((.(((((((..((((((((((((..((((.((((((....)))))).))))..))))))))))))..))))))).)))))))).

Structure

-        C       CU            ua    c      g 
 uagugUGC UGGCUCC  GUAUGCCAuuug  gagu caucac a
 |||||||| |||||||  ||||||||||||  |||| ||||||  
 gucguacg acugagg  caugcgguaagu  uuca guagug c
u        u       cu            ga    a      a 

Annotation confidence Not enough data

Genome context

chr7: 32017510-32017600 [-]

Mature mtr-miR160d

• Accession: MIMAT0011101
• Description: Medicago truncatula mtr-miR160d mature miRNA
• Sequence: 6 - UGCCUGGCUCCCUGUAUGCCA - 26
• Evidence: experimental ; 454 [2], Northern [2]

References

1. PubMed ID: 19555436
   Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
   "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
   "New Phytol (2009) 184:85-98


2. 
   "Bonnet E"
   (2007) None: