Stem-loop mtr-MIR156e

Accession

MI0005595

Description

Medicago truncatula mtr-MIR156e precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

10 open access papers mention mtr-MIR156e
(78 sentences)

Sequence

gguugUUGACAGAAGAUAGAGAGCACagaugaugauaugcauuuauauauauauauauauauauauauauauauauauauauauauauauauauauaugaggagcuggagcugcauggagaugaauuuugugcauaucacuccuuugugcucucuaugcuucugucaucacc
(((.(.(((((((((((((((((((((((.(((((((((((((((((((((((((((((((((((((((....)))))))))))))))))))))))))))(.(((....))).)...............)))))))))).)).)))))))))))))).))))))))).))))

Structure

   u U         -              u  -          -----------------------------                           u 
ggu g UGACAGAAG AUAGAGAGCACaga ga ugauaugcau                             uuauauauauauauauauauauauaua a
||| | ||||||||| |||||||||||||| || ||||||||||                             |||||||||||||||||||||||||||  
cca c acugucuuc uaucucucguguuu cu acuauacgug                             aguauauauauauauauauauauauau u
   - u         g              c  c          uuuuaaguagagguacgucgaggucgagg                           a 

Annotation confidence Not enough data

Genome context

chr8: 31820126-31820297 [+]

Mature mtr-miR156e

• Accession: MIMAT0011081
• Description: Medicago truncatula mtr-miR156e mature miRNA
• Sequence: 6 - UUGACAGAAGAUAGAGAGCAC - 26
• Evidence: experimental ; 454 [2], Northern [2]

References

1. PubMed ID: 19555436
   Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
   "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
   "New Phytol (2009) 184:85-98


2. 
   "Bonnet E"
   (2007) None: