Stem-loop mtr-MIR390

Accession

MI0005586

Description

Medicago truncatula mtr-MIR390 precursor miRNA

Gene family

MIPF0000101; MIR390

Literature search

3 open access papers mention mtr-MIR390
(12 sentences)

Sequence

cuguuAAGCUCAGGAGGGAUAGCGCCauagaaugucuucuuuuuuugguuccauuuuauugauugaucuucucuugcgcuauccauccugaguuucaugg
((((.((((((((((.(((((((((...((((.(((.((......((....)).......))..))).))))...))))))))).)))))))))).))))

Structure

    u          G         Cau    u   -u  -uuuuuu  g 
cugu AAGCUCAGGA GGAUAGCGC   agaa guc  uc       ug u
|||| |||||||||| |||||||||   |||| |||  ||       ||  
ggua uuugaguccu ccuaucgcg   ucuu uag  ag       ac u
    c          a         uuc    c   uu  uuauuuu  c 

Annotation confidence Not enough data

Genome context

chr4: 3183409-3183508 [-]

Mature mtr-miR390

• Accession: MIMAT0011072
• Description: Medicago truncatula mtr-miR390 mature miRNA
• Sequence: 6 - AAGCUCAGGAGGGAUAGCGCC - 26
• Evidence: experimental ; 454 [2], Northern [2]

References

1. PubMed ID: 19555436
   Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
   "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
   "New Phytol (2009) 184:85-98


2. 
   "Bonnet E"
   (2007) None: