miRBase entry: hsa-mir-541

Stem-loop hsa-mir-541


Accession
MI0005539
Symbol
HGNC: MIR541
Description
Homo sapiens hsa-mir-541 precursor miRNA
Gene family
MIPF0000213; mir-541

Literature search
12 open access papers mention hsa-mir-541
(79 sentences)

Sequence

241 reads, 30 reads per million, 25 experiments
acgucagggAAAGGAUUCUGCUGUCGGUCCCACUccaaaguucacagaaugggUGGUGGGCACAGAAUCUGGACUcugcuugug
(((.(((((...((((((((.((((.(..((((((....((((...))))))))))).))))))))))))...)))))..))).

Structure
-   -u     AAA        C    G UC      caaa    a 
 acg  caggg   GGAUUCUG UGUC G  CCACUc    guuc  
 |||  |||||   |||||||| |||| |  ||||||    |||| c
 ugu  gucUC   UCUAAGAC ACGG U  GGUggg    uaag  
g   uc     AGG        -    G --      ----    a 


Annotation confidence High
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Genome context
chr14: 101064495-101064578 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from hsa-mir-541
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-541 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-541-5p

Accession MIMAT0004919
Description Homo sapiens hsa-miR-541-5p mature miRNA
Sequence 10 - AAAGGAUUCUGCUGUCGGUCCCACU - 34
Evidence not_experimental
Database links
Predicted targets

Mature hsa-miR-541-3p

Accession MIMAT0004920
Description Homo sapiens hsa-miR-541-3p mature miRNA
Sequence 54 - UGGUGGGCACAGAAUCUGGACU - 75
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414