miRBase entry: mmu-mir-876

Stem-loop mmu-mir-876


Accession
MI0005480
Symbol
MGI: Mir876
Description
Mus musculus mmu-mir-876 precursor miRNA
Gene family
MIPF0000430; mir-876

Literature search
4 open access papers mention mmu-mir-876
(35 sentences)

Sequence

15 reads, 3 reads per million, 9 experiments
ucacgugcuaUGGAUUUCUCUGUGAAUCACUAuaucaaaucuaguguggUAGUGGUUUACAAAGUAAUUCAuagugcuuca
....((((((((((((.((.(((((((((((((..((.......))..))))))))))))).)).))))))))))))....

Structure
ucac            U  C             au  aa 
    gugcuaUGGAUU CU UGUGAAUCACUAu  ca  u
    |||||||||||| || |||||||||||||  ||  c
    cgugauACUUAA GA ACAUUUGGUGAUg  gu  u
acuu            U  A             gu  ga 


Annotation confidence Not enough data
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Genome context
chr4: 36645373-36645453 [-]

Database links

Mature mmu-miR-876-5p

Accession MIMAT0004854
Description Mus musculus mmu-miR-876-5p mature miRNA
Sequence 11 - UGGAUUUCUCUGUGAAUCACUA - 32
Evidence experimental
cloned [1], Illumina [2-3]
Database links
Predicted targets

Mature mmu-miR-876-3p

Accession MIMAT0004855
Description Mus musculus mmu-miR-876-3p mature miRNA
Sequence 50 - UAGUGGUUUACAAAGUAAUUCA - 71
Evidence experimental
Illumina [2-3]

References

  1. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414

  2. PubMed ID: 20215419
    MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
    "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
    "Mol Hum Reprod (2010) 16:463-471

  3. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009