miRBase entry: bta-mir-497

Stem-loop bta-mir-497


Accession
MI0005467
Description
Bos taurus bta-mir-497 precursor miRNA
Gene family
MIPF0000231; mir-497

Literature search
3 open access papers mention bta-mir-497
(19 sentences)

Sequence

16899 reads, 199 reads per million, 67 experiments
ccaccccaguccugcucccgcccCAGCAGCACACUGUGGUUUGUAcggcacuguggccacguccaaaccacacugugguguuagagcgagggugggggaggcaccgcugagg
...((.(((((((.((((((((((((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).....).))))))))))))....)))).))

Structure
cca  c    ----   g         - -----    G    C         U  --   ac 
   cc cagu    ccu cucccgccc C     AGCA CACA UGUGGUUUG Ac  ggc  u
   || ||||    ||| ||||||||| |     |||| |||| ||||||||| ||  |||   
   gg gucg    gga ggggguggg g     uugu gugu acaccaaac ug  ccg  g
---  a    ccac   -         a cgaga    g    c         c  ca   gu 


Annotation confidence Not enough data
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Genome context
chr19: 27583523-27583634 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-497
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-497

Accession MIMAT0004343
Description Bos taurus bta-miR-497 mature miRNA
Sequence 24 - CAGCAGCACACUGUGGUUUGUA - 45
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988