Stem-loop sequence bta-let-7e

AccessionMI0005455 (change log)
DescriptionBos taurus let-7e stem-loop
Gene family MIPF0000002; let-7
Literature search

52 open access papers mention bta-let-7e
(205 sentences)

Stem-loop 
     c   cu   g                u  ----gga  a 
5' cc ggg  gag uaggagguuguauagu ga       gg c
   || |||  ||| |||||||||||||||| ||       ||  
3' gg ccc  uuc auccuccggcauauca cu       cc a
     a   cu   g                -  agaggaa  c
Get sequence
Deep sequencing
2745651 reads, 1.28e+04 reads per million, 78 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr18: 58266748-58266826 [+]
intergenic
Clustered miRNAs
< 10kb from bta-let-7e
bta-mir-99bchr18: 58266580-58266649 [+]
bta-let-7echr18: 58266748-58266826 [+]
bta-mir-125achr18: 58267247-58267332 [+]
Database links

Mature sequence bta-let-7e

Accession MIMAT0004333
Sequence

8 -  

ugagguaggagguuguauagu

 - 28

Get sequence
Deep sequencing2744920 reads, 78 experiments
Evidence experimental; cloned [1]
Predicted targets

References

1
PMID:17306260 "Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland" Gu Z, Eleswarapu S, Jiang H FEBS Lett. 581:981-988(2007).