miRBase entry: ath-MIR866

Stem-loop ath-MIR866


Accession
MI0005443
Description
Arabidopsis thaliana ath-MIR866 precursor miRNA

Literature search
1 open access papers mention ath-MIR866
(1 sentences)

Sequence

ucaucuauucuuacuuuUCAAGGAACGGAUUUUGUUAAcuaaaugauucacacccuugaagaaacacgaucucgugugaaucauuucguuaACAAAAUCCGUCUUUGAAGAguaaguauauuguga
((((.(((.(((((((((((((((.((((((((((((((.(((((((((((((..(((........)))....))))))))))))).))))))))))))))))))))))))))))).)))..))))

Structure
    -c   u               A              u             --cc   aag 
ucau  uau cuuacuuuUCAAGGA CGGAUUUUGUUAAc aaaugauucacac    uug   a
||||  ||| ||||||||||||||| |||||||||||||| |||||||||||||    |||    
agug  aua gaaugAGAAGUUUCU GCCUAAAACAauug uuuacuaagugug    agc   a
    uu   u               -              c             cucu   aca 


Annotation confidence Not enough data
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Genome context
chr5: 16157823-16157948 [-]

Database links

Mature ath-miR866-5p

Accession MIMAT0004315
Description Arabidopsis thaliana ath-miR866-5p mature miRNA
Sequence 18 - UCAAGGAACGGAUUUUGUUAA - 38
Evidence experimental
cloned [1]

Mature ath-miR866-3p

Accession MIMAT0004316
Description Arabidopsis thaliana ath-miR866-3p mature miRNA
Sequence 92 - ACAAAAUCCGUCUUUGAAGA - 111
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17299599
    High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes
    Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC
    PLoS One (2007) 2:e219