miRBase entry: ath-MIR864

Stem-loop ath-MIR864


Accession
MI0005441
Description
Arabidopsis thaliana ath-MIR864 precursor miRNA

Literature search
2 open access papers mention ath-MIR864
(2 sentences)

Sequence

gcuUCAGGUAUGAUUGACUUCAAAaaauaccuugaaacuauaaaccucaguuucuuugaauuugauuuuUAAAGUCAAUAAUACCUUGAAGc
(((((((((((.((((((((.(((((.......((((((.........))))))...........))))).)))))))).))))).))))))

Structure
      -     G        C     ----auaccuu      aua 
gcuUCA GGUAU AUUGACUU AAAaa           gaaacu   a
|||||| ||||| |||||||| |||||           ||||||   a
cGAAGU CCAUA UAACUGAA Uuuuu           cuuuga   c
      U     A        A     aguuuaaguuu      cuc 


Annotation confidence Not enough data
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Genome context
chr1: 6740500-6740591 [+]

Database links

Mature ath-miR864-5p

Accession MIMAT0004311
Description Arabidopsis thaliana ath-miR864-5p mature miRNA
Sequence 4 - UCAGGUAUGAUUGACUUCAAA - 24
Evidence experimental
cloned [1]

Mature ath-miR864-3p

Accession MIMAT0004312
Description Arabidopsis thaliana ath-miR864-3p mature miRNA
Sequence 70 - UAAAGUCAAUAAUACCUUGAAG - 91
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17299599
    High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes
    Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, Sullivan CM, Cumbie JS, Givan SA, Law TF, Grant SR, Dangl JL, Carrington JC
    PLoS One (2007) 2:e219