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miRBase |
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Stem-loop sequence ath-MIR861 |
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Accession | MI0005438 (change log) | ||||
Description | Arabidopsis thaliana miR861 stem-loop | ||||
Gene family | MIPF0001190; MIR861 | ||||
Literature search |
3 open access papers mention ath-MIR861 | ||||
Stem-loop |
uc c u a g au cg - ug a 5' guaucauuguuu gaa ga guccuuggaga auau cguca ggaguc ucuu cu aga g |||||||||||| ||| || ||||||||||| |||| ||||| |||||| |||| || ||| c 3' caugguaacaaa cuu cu caggaacuucu uaua guagu ucuuag agag ga uuu a -- u u g g ac ua u gu u |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ath-miR861-5p |
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Accession | MIMAT0004305 |
Sequence |
24 - ccuuggagaaauaugcgucaa - 44 |
Evidence | experimental; 454 [1], cloned [1], Illumina [2] |
Mature sequence ath-miR861-3p |
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Accession | MIMAT0004306 |
Sequence |
93 - gauggauaugucuucaaggac - 113 |
Evidence | experimental; 454 [1], cloned [1] |
References |
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1 |
PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"
PLoS One. 2:e219(2007).
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2 |
PMID:19815687
"Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis"
J Exp Bot. 61:165-177(2010).
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