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miRBase |
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Stem-loop sequence ath-MIR857 |
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Accession | MI0005434 (change log) | |||||||||
Description | Arabidopsis thaliana miR857 stem-loop | |||||||||
Gene family | MIPF0001180; MIR857 | |||||||||
Literature search |
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5 open access papers mention ath-MIR857 | |||||||||
Stem-loop |
c caa c ga cacccaaaa ug g g uuuaaaauagugacuuguuuuuuuuaaaauguuuuuuaagaauguuuuuucagcuuuuuauuuuauuuuaaaccuaaagguagcgugacuauuguggagaaaua 5' uucga uccuacaa acuuuca cauacaaaauaau agaaaa agguu aaugu uga guuagucucauu a ||||| |||||||| ||||||| ||||||||||||| |||||| ||||| ||||| ||| |||||||||||| 3' aggcu aggauguu uggaagu guauguuuuauug ucuuuu uuuaa uuacg gcu caauuagaguaa a a aug u aa -uuuagauc gu a g uuaucuuuuacagauauaaggcaaauuuuaucacuguaacaaaaauuuauauauaaaauuuuguuguagaaugauauuugguuuuuauaaaaaagaauacaaag |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence ath-miR857 |
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Accession | MIMAT0004301 |
Sequence |
344 - uuuuguauguugaagguguau - 364 |
Evidence | experimental; cloned [1] |
References |
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1 |
PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"
PLoS One. 2:e219(2007).
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