miRBase entry: cbr-mir-785a

Stem-loop cbr-mir-785a

Accession

MI0005418

Description

Caenorhabditis briggsae cbr-mir-785a precursor miRNA

Gene family

MIPF0000896; mir-785

Sequence

uugcucuuucgcaaccgucagcacagagugcuucgacuuacacagaauucguaaaaccaacugaugUAAGUGAAUACUCUGUGUUGAuggugaugaugcugaa
.(((......)))(((((((((((((((((.(((.((((((((((...............))).)))))))))))))))))))))))))))............

Structure

uugcucuuucgca                 c   g       -   aauucg 
             accgucagcacagagug uuc acuuaca cag      u
             ||||||||||||||||| ||| ||||||| |||      a
             ugguAGUUGUGUCUCAU AAG UGAAUgu guc      a
-aagucguaguag                 -   -       a   aaccaa

Annotation confidence Not enough data

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Genome context

chrX: 8055311-8055413 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cbr-mir-785a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-785a

Accession	MIMAT0004286
Description	Caenorhabditis briggsae cbr-miR-785a mature miRNA
Sequence	67 - UAAGUGAAUACUCUGUGUUGA - 87
Evidence	not_experimental

References

PubMed ID: 17174894
Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans
"Ruby JG, Jan C, Player C, Axtell MJ, Lee W, Nusbaum C, Ge H, Bartel DP"
"Cell (2006) 127:1193-1207