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miRBase |
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Stem-loop sequence ath-MIR853 |
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Accession | MI0005408 (change log) | ||||
Description | Arabidopsis thaliana miR853 stem-loop | ||||
Gene family | MIPF0001182; MIR853 | ||||
Literature search |
1 open access papers mention ath-MIR853 | ||||
Stem-loop |
gagaggaacaauuaggguuguuucaa ---------- g c c ua c g a - cucuucaaggaacuugugggccucaagaaaaccugcuauaauucuaguuuuucaacau 5' acaggguaa agu uuc ugcugcuccccu uu g uug aga gcca guaaauaucuuu u ||||||||| ||| ||| |||||||||||| || | ||| ||| |||| |||||||||||| 3' ugucccauu uca aag acgacgagggga ag c aac ucu cggu cauuuauagaaa c ---------uagacaaaaacuguuua cccaauuuuc - u a gc - g c u cuccuucaagguaagagguaagaauucccauuccucaacaacgacuauagucuuccuc |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ath-miR853 |
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Accession | MIMAT0004276 |
Sequence |
50 - uccccucuuuagcuuggagaag - 71 |
Evidence | experimental; 454 [1], cloned [2] |
References |
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1 |
PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"
Genes Dev. 20:3407-3425(2006).
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2 |
PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"
PLoS One. 2:e219(2007).
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