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miRBase |
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Stem-loop sequence ath-MIR841a |
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Accession | MI0005397 (change log) | |||||||||||
Previous IDs | ath-MIR841 | |||||||||||
Description | Arabidopsis thaliana miR841 stem-loop | |||||||||||
Gene family | MIPF0001112; MIR841 | |||||||||||
Literature search |
6 open access papers mention ath-MIR841a | |||||||||||
Stem-loop |
g ca u -gc a u a u g u c g caauaucaguauaaaauuuuau 5' caccaa c acuaugu aga acucug ucuu aguugc ugugaauacga ccacu gaaa ugaaa aaacaaagaaa c |||||| | ||||||| ||| |||||| |||| |||||| ||||||||||| ||||| |||| ||||| ||||||||||| 3' gugguu g ugguaca ucu ugagau agaa ucaacg acacuuaugcu gguga cuuu acuuu uuuguuucuuu a - ca c aca a c c u g u a a aaaguaaaaaacaucauauuaa |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence ath-miR841a-5p |
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Accession | MIMAT0004263 |
Previous IDs | ath-miR841a |
Sequence |
50 - uacgagccacuugaaacugaa - 70 |
Evidence | experimental; 454 [1], Illumina [2] |
Mature sequence ath-miR841a-3p |
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Accession | MIMAT0032022 |
Sequence |
147 - auuucuagugggucguauuca - 167 |
Evidence | not experimental |
References |
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1 |
PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"
Genes Dev. 20:3407-3425(2006).
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2 |
PMID:19815687
"Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis"
J Exp Bot. 61:165-177(2010).
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