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miRBase |
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Stem-loop sequence ath-MIR830 |
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Accession | MI0005386 (change log) | ||||
Description | Arabidopsis thaliana miR830 stem-loop | ||||
Literature search |
1 open access papers mention ath-MIR830 | ||||
Stem-loop |
cagagucucgcuagugucuuuacuaaacacaa uc a - - a u c c u g acauauaauaau a 5' aa uguaa cgc cu cg uc c ucuucuc aaauaguu agguua cug uc a || ||||| ||| || || || | ||||||| |||||||| |||||| ||| || 3' uu acauu gcg ga gc ag g agaagag uuuaucaa uccaau gac ag u --gcuacaagaaguuuuaaguucgugagagga ga a a a a u a u - a cucuuugacccc a |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence ath-miR830-5p |
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Accession | MIMAT0004247 |
Previous IDs | ath-miR830* |
Sequence |
56 - ucuucuccaaauaguuuagguu - 77 |
Evidence | experimental; cloned [2] |
Mature sequence ath-miR830-3p |
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Accession | MIMAT0004248 |
Previous IDs | ath-miR830 |
Sequence |
124 - uaacuauuuugagaagaagug - 144 |
Evidence | experimental; 454 [1-2], cloned [2], Illumina [3] |
References |
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1 |
PMID:17182867
"A diverse and evolutionarily fluid set of microRNAs in Arabidopsis thaliana"
Genes Dev. 20:3407-3425(2006).
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2 |
PMID:17299599
"High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes"
PLoS One. 2:e219(2007).
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3 |
PMID:19815687
"Hypoxia-responsive microRNAs and trans-acting small interfering RNAs in Arabidopsis"
J Exp Bot. 61:165-177(2010).
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