miRBase entry: mdo-mir-302d

Stem-loop mdo-mir-302d


Accession
MI0005374
Description
Monodelphis domestica mdo-mir-302d precursor miRNA
Gene family
MIPF0000071; mir-302


Sequence

3 reads, 0 reads per million, 2 experiments
ccucugcuuuaacauggaagugcuugcugugauuuuaaaaaauUAAGUGCUUCCAUGUUUGAGUuguggug
((.(.((((.((((((((((((((((.................)))))))))))))))).)))).).))..

Structure
--  u u    u                cugugau 
  cc c gcuu aacauggaagugcuug       u
  || | |||| ||||||||||||||||       u
  gg g UGAG UUGUACCUUCGUGAAU       u
gu  u u    U                uaaaaaa 


Annotation confidence Not enough data
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Genome context
chr5: 66074486-66074556 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from mdo-mir-302d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-302d

Accession MIMAT0004183
Description Monodelphis domestica mdo-miR-302d mature miRNA
Sequence 44 - UAAGUGCUUCCAUGUUUGAGU - 64
Evidence not_experimental

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72