Stem-loop mdo-let-7g

Accession

MI0005331

Description

Monodelphis domestica mdo-let-7g precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

276072 reads, 4532 reads per million, 5 experiments

aggcUGAGGUAGUAGUUUGUACAGUuugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCC
.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).)))))))))))

Structure

a   U        A            ugagg    -a  a    a 
 ggc GAGGUAGU GUUUGUACAGUu     gucu  ug uacc c
 ||| |||||||| ||||||||||||     ||||  || ||||  
 CCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
-   -        C            -----    gg  -    c 

Annotation confidence High

Genome context

chr6: 277022691-277022773 [+]

Mature mdo-let-7g-5p

• Accession: MIMAT0004142
• Description: Monodelphis domestica mdo-let-7g-5p mature miRNA
• Sequence: 5 - UGAGGUAGUAGUUUGUACAGU - 25
• Evidence: experimental ; Illumina [2]

Mature mdo-let-7g-3p

• Accession: MIMAT0026687
• Description: Monodelphis domestica mdo-let-7g-3p mature miRNA
• Sequence: 62 - CUGUACAGGCCACUGCCUUGCC - 83
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17965199
   In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
   "Devor EJ, Samollow PB"
   "J Hered (2008) 99:66-72


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45