miRBase entry: mdo-mir-208a

Stem-loop mdo-mir-208a


Accession
MI0005318
Description
Monodelphis domestica mdo-mir-208a precursor miRNA
Gene family
MIPF0000178; mir-208


Sequence

180 reads, 12 reads per million, 1 experiments
uuccugugacaggugagcuuuugguccggguuauaccugaugcauguguAUAAGACGAGCAAAAAGCUCGUuggucg
.......(((...(((((((((.((.((..(((((((........).))))))..)).)).)))))))))...))).

Structure
uuccugu   agg         g  c  gg      - uga 
       gac   ugagcuuuu gu cg  uuauac c   u
       |||   ||||||||| || ||  |||||| |    
       cug   GCUCGAAAA CG GC  AAUAug g   g
------g   guU         A  A  AG      u uac 


Annotation confidence Not enough data
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Genome context
chr1: 172794234-172794310 [-]

Database links

Mature mdo-miR-208a

Accession MIMAT0004129
Description Monodelphis domestica mdo-miR-208a mature miRNA
Sequence 50 - AUAAGACGAGCAAAAAGCUCGU - 71
Evidence not_experimental

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72