miRBase entry: mdo-mir-7

Stem-loop mdo-mir-7


Accession
MI0005270
Description
Monodelphis domestica mdo-mir-7 precursor miRNA
Gene family
MIPF0000022; mir-7


Sequence

2392 reads, 71 reads per million, 5 experiments
uuggccuaguucugugUGGAAGACUAGUGAUUUUGUUGuuuuuagauaacuaaaacgacaacaaaucacagucugcc
.................((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).))

Structure
uuggccuaguucugugU  A     A       U      --     a 
                 GG AGACU GUGAUUU GUUGuu  uuuag u
                 || ||||| ||||||| ||||||  |||||  
                 cc ucuga cacuaaa caacag  aaauc a
-----------------  g     -       -      ca     a 


Annotation confidence Not enough data
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Genome context
chr6: 127713720-127713796 [+]

Database links

Mature mdo-miR-7

Accession MIMAT0004086
Description Monodelphis domestica mdo-miR-7 mature miRNA
Sequence 17 - UGGAAGACUAGUGAUUUUGUUG - 38
Evidence not_experimental

References

  1. PubMed ID: 17965199
    In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica
    "Devor EJ, Samollow PB"
    "J Hered (2008) 99:66-72