Stem-loop sequence mmu-mir-742

AccessionMI0005206 (change log)
Symbol MGI:Mir742
DescriptionMus musculus miR-742 stem-loop
Gene family MIPF0000412; mir-742
Literature search

3 open access papers mention mmu-mir-742
(5 sentences)

       c      -      u   aa    g  a 
5' ugcu uacuca cauggu gcu  ucac ug a
   |||| |||||| |||||| |||  |||| || g
3' auga augggu guacca cga  agug au u
       a      c      c   -a    g  g 
Get sequence
Deep sequencing
888 reads, 88 reads per million, 25 experiments
Confidence Annotation confidence: high
Feedback: Do you believe this miRNA is real?
Genome context
Coordinates (GRCm38; GCA_000001635.2) Overlapping transcripts
chrX: 66780373-66780437 [-]
Clustered miRNAs
< 10kb from mmu-mir-742
mmu-mir-883bchrX: 66789890-66789967 [-]
mmu-mir-883achrX: 66780758-66780833 [-]
mmu-mir-742chrX: 66780373-66780437 [-]
mmu-mir-743bchrX: 66777256-66777332 [-]
mmu-mir-743achrX: 66776757-66776818 [-]
Database links

Mature sequence mmu-miR-742-5p

Accession MIMAT0004838
Previous IDsmmu-miR-742*

6 - 


 - 26

Get sequence
Deep sequencing303 reads, 19 experiments
Evidence experimental; cloned [2], Illumina [4-5]
Database links
Predicted targets

Mature sequence mmu-miR-742-3p

Accession MIMAT0004237
Previous IDsmmu-miR-742

41 - 


 - 62

Get sequence
Deep sequencing585 reads, 24 experiments
Evidence experimental; cloned [1-2], 454 [3], Illumina [4-5]
Database links
Predicted targets


PMID:17604727 "A mammalian microRNA expression atlas based on small RNA library sequencing" Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M Cell. 129:1401-1414(2007).
PMID:17989215 "RNA sequence analysis defines Dicer's role in mouse embryonic stem cells" Calabrese JM, Seila AC, Yeo GW, Sharp PA Proc Natl Acad Sci U S A. 104:18097-18102(2007).
PMID:20215419 "MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing" Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A Mol Hum Reprod. 16:463-471(2010).
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).