Stem-loop sequence ath-MIR782

AccessionMI0005112 (change log)
DescriptionArabidopsis thaliana miR782 stem-loop
Gene family MIPF0001269; MIR2934
Literature search

2 open access papers mention ath-MIR782
(2 sentences)

              a     a        g      aaauaagaugaaaaggcuauu 
5' aaccuuuuucu caaac ccuuggau uucuuu                     a
   ||||||||||| ||||| |||||||| ||||||                     u
3' uuggagaaaga guuug ggaaccua aagaaa                     u
              c     c        a      accgaaguacaacaaguaauc 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (TAIR10; GCA_000001735.1) Overlapping transcripts
chr3: 5500037-5500147 [+]
Clustered miRNAs
< 10kb from ath-MIR782
ath-MIR5023chr3: 5496985-5497119 [-]
ath-MIR2934chr3: 5500032-5500152 [-]
ath-MIR782chr3: 5500037-5500147 [+]
Database links

Mature sequence ath-miR782

Accession MIMAT0003941

12 - 


 - 32

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Evidence experimental; MPSS [1], Northern [1]


PMID:16954541 "MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant" Lu C, Kulkarni K, Souret FF, MuthuValliappan R, Tej SS, Poethig RS, Henderson IR, Jacobsen SE, Wang W, Green PJ, Meyers BC Genome Res. 16:1276-1288(2006).