Stem-loop sequence mtr-MIR395k

Accession

MI0005078 (change log)

Description

Medicago truncatula miR395k stem-loop

Stem-loop

            ug           cau     --a    ---   -u   uuu 
5' gaguuccuu  aacgcuucaug   gagaa   uauc   ucu  ugg   a
   |||||||||  |||||||||||   |||||   ||||   |||  |||    
3' cucaagggg  uugugaaguau   cuuuu   auag   aga  acc   a
            gu           cuu     aug    aaa   uu   uaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_Mt3.5.2): chr5: 16553926-16553997 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from mtr-MIR395k

• mtr-MIR395k: chr5: 16553926-16553997 [+]
• mtr-MIR2665: chr5: 16554970-16555082 [-]
• mtr-MIR395o: chr5: 16556404-16556486 [-]

Database links

• miRBase Tracker:MI0005078