Stem-loop sequence mtr-MIR395i

Accession

MI0005076 (change log)

Description

Medicago truncatula miR395i stem-loop

Gene family

MIPF0000016; MIR395

Literature search

5 open access papers mention mtr-MIR395i
(12 sentences)

Stem-loop

            ug         -auc ug   caau    a 
5' gaguuccuc  aaugcuuca    a  aga    cuau u
   |||||||||  |||||||||    |  |||    ||||  
3' cucaagggg  uugugaagu    u  ucu    gaua g
            gu         aacu gu   ---u    a 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (JCVI_Mt3.5.2): chr5: 16656267-16656342 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from mtr-MIR395i

• mtr-MIR395i: chr5: 16656267-16656342 [-]
• mtr-MIR395b: chr5: 16653454-16653577 [-]

Database links

• miRBase Tracker:MI0005076

Mature sequence mtr-miR395i

• Accession: MIMAT0003862
• Sequence: 56 - augaaguguuugggggaacuc - 76
• Evidence: by similarity; MI0001033

References

1. PMID:16117853 "Molecular evolution of the rice miR395 gene family" Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L Cell Res. 15:631-638(2005).