Stem-loop mtr-MIR395h

Accession

MI0005075

Description

Medicago truncatula mtr-MIR395h precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

5 open access papers mention mtr-MIR395h
(12 sentences)

Sequence

gacuuucucugaacacuucauacaagagguuauccaucuaaucuaaaagucauuagauauuuacgaugggucguucuucaAUGAAGUGUUUGGGGGAACUU
...((((((((((((((((((..(((((...(((((((((((((((......))))))...)).)))))))..)))))..))))))))))))))))))...

Structure

gac                  ac     guu       -  ---      aa 
   uuucucugaacacuucau  aagag   auccauc ua   aucuaa  g
   ||||||||||||||||||  |||||   ||||||| ||   ||||||   
   AAGGGGGUUUGUGAAGUA  uucuu   uggguag au   uagauu  u
UUC                  ac     -gc       c  uua      ac 

Annotation confidence Not enough data

Genome context

chr5: 16641990-16642090 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR395h

Mature mtr-miR395h

• Accession: MIMAT0003861
• Description: Medicago truncatula mtr-miR395h mature miRNA
• Sequence: 81 - AUGAAGUGUUUGGGGGAACUU - 101
• Evidence: not_experimental

References

1. PubMed ID: 16117853
   Molecular evolution of the rice miR395 gene family
   "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
   "Cell Res (2005) 15:631-638