miRBase entry: mtr-MIR395g

Stem-loop mtr-MIR395g


Accession
MI0005074
Description
Medicago truncatula mtr-MIR395g precursor miRNA
Gene family
MIPF0000016; MIR395

Literature search
5 open access papers mention mtr-MIR395g
(12 sentences)

Sequence

gaguuccucugaacgcuucauauaagagguuauccaucuucaUUGAAGUGUUUGGGGGAACUC
((((((((((((((((((((...((((((....)).))))...))))))))))))))))))))

Structure
                    uau    -  u 
gaguuccucugaacgcuuca   aaga gg u
||||||||||||||||||||   |||| ||  
CUCAAGGGGGUUUGUGAAGU   uucu cc a
                    Uac    a  u 


Annotation confidence Not enough data
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Genome context
chr5: 16636838-16636900 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mtr-MIR395g
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mtr-miR395g

Accession MIMAT0003860
Description Medicago truncatula mtr-miR395g mature miRNA
Sequence 43 - UUGAAGUGUUUGGGGGAACUC - 63
Evidence not_experimental

References

  1. PubMed ID: 16117853
    Molecular evolution of the rice miR395 gene family
    "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
    "Cell Res (2005) 15:631-638