miRBase entry: bta-mir-210

Stem-loop bta-mir-210


Accession
MI0005039
Description
Bos taurus bta-mir-210 precursor miRNA
Gene family
MIPF0000086; mir-210

Literature search
10 open access papers mention bta-mir-210
(20 sentences)

Sequence

6646 reads, 101 reads per million, 71 experiments
ccuccaggcgcagggcagccacugcccaccgcacacugcgcugcuccggacccACUGUGCGUGUGACAGCGGCUGAucugucccugggcagcgcgacc
..((((((.((((..(((((.(((..(((((((((.((.((((...))).).)).)))))).))).))).)))))..)))).))))))..........

Structure
--------cc      c    gg     a   cc   -      c  c -   c 
          uccagg gcag  cagcc cug  cac cgcaca ug g cug  
          |||||| ||||  ||||| |||  ||| |||||| || | ||| u
          gggucc uguc  GUCGG GAC  GUG GCGUGU Ac c ggc  
ccagcgcgac      c    uA     C   -A   U      C  c a   c 


Annotation confidence High
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Genome context
chr29: 51369011-51369108 [+]

Database links

Mature bta-miR-210

Accession MIMAT0003824
Description Bos taurus bta-miR-210 mature miRNA
Sequence 54 - ACUGUGCGUGUGACAGCGGCUGA - 76
Evidence experimental
cloned [1-2]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43

  2. PubMed ID: 17306260
    Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
    "Gu Z, Eleswarapu S, Jiang H"
    "FEBS Lett (2007) 581:981-988