miRBase entry: bta-mir-369

Stem-loop bta-mir-369


Accession
MI0005020
Description
Bos taurus bta-mir-369 precursor miRNA
Gene family
MIPF0000018; mir-154

Literature search
3 open access papers mention bta-mir-369
(13 sentences)

Sequence

6191 reads, 78 reads per million, 63 experiments
ugaagggagAUCGACCGUGUUAUAUUCGCuuuauugacuucgAAUAAUACAUGGUUGAUCUUUucucag
(((.((((((((((((((((..((((((............))))))..)))))))))))))))).))).

Structure
-   a                UA      Cuuua 
 uga gggagAUCGACCGUGU  UAUUCG     u
 ||| ||||||||||||||||  ||||||      
 acu uUUUCUAGUUGGUACA  AUAAgc     u
g   c                UA      uucag 


Annotation confidence High
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Genome context
chr21: 67881914-67881982 [+]
Clustered miRNAs
15 other miRNAs are < 10 kb from bta-mir-369
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-369-5p

Accession MIMAT0003801
Description Bos taurus bta-miR-369-5p mature miRNA
Sequence 10 - AUCGACCGUGUUAUAUUCGC - 29
Evidence not_experimental

Mature bta-miR-369-3p

Accession MIMAT0003802
Description Bos taurus bta-miR-369-3p mature miRNA
Sequence 43 - AAUAAUACAUGGUUGAUCUUU - 63
Evidence experimental
cloned [1]

References

  1. PubMed ID: 17105755
    Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
    "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
    "Physiol Genomics (2007) 29:35-43