Stem-loop sequence bta-mir-139

AccessionMI0005009 (change log)
DescriptionBos taurus miR-139 stem-loop
Gene family MIPF0000117; mir-139
Literature search

4 open access papers mention bta-mir-139
(105 sentences)

Stem-loop 
   gug       -   u  a            g gg 
5'    uacucua cag gc cgugucuccagu u  c
      ||||||| ||| || |||||||||||| |  u
3'    augaggu guc cg gcgcagaggucg a  c
   -ca       u   c  -            g gg
Get sequence
Deep sequencing
4757 reads, 0 reads per million, 66 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Btau_5.0.1; GCA_000003205.6) Overlapping transcripts
chr15: 53212535-53212602 [-]
sense
ENSBTAT00000011077 ; PDE2A-201; intron 2
Database links

Mature sequence bta-miR-139

Accession MIMAT0003788
Sequence

7 -  

ucuacagugcacgugucuccagu

 - 29

Get sequence
Deep sequencing4656 reads, 65 experiments
Evidence experimental; cloned [1]
Predicted targets

References

1
PMID:17105755 "Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues" Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP Physiol Genomics. 29:35-43(2007).