Stem-loop mmu-mir-490

Accession

MI0005002

Symbol

MGI: Mir490

Description

Mus musculus mmu-mir-490 precursor miRNA

Gene family

MIPF0000229; mir-490

Literature search

14 open access papers mention mmu-mir-490
(63 sentences)

Sequence

2372 reads, 31 reads per million, 37 experiments

uggaaaguucauuguucgacaCCAUGGAUCUCCAGGUGGGUcacguuuagauauacacCAACCUGGAGGACUCCAUGCUGuuga
...............((((((.(((((((((((((((.(((...((........))))).)))))))))..)))))).))))))

Structure

uggaaaguucauugu      C      --         G   cac  uua 
               ucgaca CAUGGA  UCUCCAGGU GGU   gu   g
               |||||| ||||||  ||||||||| |||   ||    
               aguuGU GUACCU  GGAGGUCCA Cca   ca   a
---------------      C      CA         A   ---  uau 

Annotation confidence High

Genome context

chr6: 36421742-36421825 [+]

Mature mmu-miR-490-5p

• Accession: MIMAT0017261
• Description: Mus musculus mmu-miR-490-5p mature miRNA
• Sequence: 22 - CCAUGGAUCUCCAGGUGGGU - 41
• Evidence: experimental ; Illumina [3]

Mature mmu-miR-490-3p

• Accession: MIMAT0003780
• Description: Mus musculus mmu-miR-490-3p mature miRNA
• Sequence: 59 - CAACCUGGAGGACUCCAUGCUG - 80
• Evidence: experimental ; MPSS [1], Illumina [2-3]

References

1. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


2. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


3. PubMed ID: 16582102
   The expression profile of microRNAs in mouse embryos
   "Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M, Asada K, Mirochnitchenko O, Inouye M, Kato I"
   "Nucleic Acids Res (2006) 34:1765-1771