Stem-loop sequence gga-mir-460a

AccessionMI0004998 (change log)
Previous IDsgga-mir-460
DescriptionGallus gallus miR-460a stem-loop
Gene family MIPF0000134; mir-460
Literature search

7 open access papers mention gga-mir-460a
(16 sentences)

Stem-loop 
   ----c     -a     cac ug       ca a        guua 
5'      ugacu  uauag   c  cauugua  c cugugugu    a
        |||||  |||||   |  |||||||  | ||||||||    c
3'      acuga  auguc   g  guaacau  g gacacgua    u
   cacuc     ag     uua gu       ac c        aagg
Get sequence
Deep sequencing
47259 reads, 500 reads per million, 5 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Gallus_gallus-5.0; GCA_000002315.3) Overlapping transcripts
chr2: 3692580-3692669 [+]
sense
ENSGALT00000008796 ; PTH1R-201; intron 7
Database links

Mature sequence gga-miR-460a-5p

Accession MIMAT0003778
Previous IDsgga-miR-460
Sequence

15 -  

ccugcauuguacacacugugug

 - 36

Get sequence
Deep sequencing38166 reads, 5 experiments
Evidence experimental; cloned [1], Illumina [2]
Predicted targets

Mature sequence gga-miR-460a-3p

Accession MIMAT0026646
Sequence

52 -  

cacagcgcauacaauguggauu

 - 73

Get sequence
Deep sequencing9082 reads, 5 experiments
Evidence experimental; Illumina [2]
Predicted targets

References

1
PMID:16750530 "Identification of microRNAs from different tissues of chicken embryo and adult chicken" Xu H, Wang X, Du Z, Li N FEBS Lett. 580:3610-3616(2006).
2
PMID:23034410 "Birth and expression evolution of mammalian microRNA genes" Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H Genome Res. 23:34-45(2013).