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miRBase |
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Stem-loop sequence bmo-mir-10 |
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Accession | MI0004973 (change log) | ||||
Description | Bombyx mori miR-10 stem-loop | ||||
Gene family | MIPF0000033; mir-10 | ||||
Literature search |
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8 open access papers mention bmo-mir-10 | ||||
Stem-loop |
a c cu - g u ugaa 5' gugc cuacau acc cu uaga ccgaauuuguu g |||| |||||| ||| || |||| ||||||||||| u 3' cacg ggugug ugg ga aucu ggcuuaaacag g g u uu a g u cgga |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
Tong et al erroneously published the reverse complement of the sequence shown here [1]. |
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Genome context |
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Database links |
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Mature sequence bmo-miR-10-5p |
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Accession | MIMAT0004195 |
Previous IDs | bmo-miR-10 |
Sequence |
15 - acccuguagauccgaauuugu - 35 |
Deep sequencing | 3453 reads, 3 experiments |
Evidence | experimental; cloned [3], RT-PCR [4], Illumina [5] |
Database links |
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Mature sequence bmo-miR-10-3p |
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Accession | MIMAT0015226 |
Previous IDs | bmo-miR-10* |
Sequence |
50 - caaauucgguucuagagagguuu - 72 |
Deep sequencing | 8505 reads, 3 experiments |
Evidence | experimental; Illumina [5] |
Database links |
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References |
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1 |
PMID:16972323
"Computational prediction of microRNA genes in silkworm genome"
J Zhejiang Univ Sci B. 7:806-816(2006).
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2 |
PMID:18507836
"Identification and characteristics of microRNAs from Bombyx mori"
BMC Genomics. 9:248(2008).
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3 |
PMID:18714353
"The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages"
PLoS One. 3:e2997(2008).
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4 |
PMID:18977439
"Identification of conserved microRNAs in Bombyx mori (silkworm) and regulation of fibroin L chain production by microRNAs in heterologous system"
Insect Biochem Mol Biol. 38:1066-1071(2008).
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5 |
PMID:20199675
"MicroRNAs of Bombyx mori identified by Solexa sequencing"
BMC Genomics. 11:148(2010).
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