miRBase entry: xtr-mir-18b

Stem-loop xtr-mir-18b


Accession
MI0004959
Description
Xenopus tropicalis xtr-mir-18b precursor miRNA
Gene family
MIPF0000001; mir-17


Sequence

ccuuguguUAAGGUGCAUCUAGUGCAGUUAGugacauaguguagcaucuacugcccuaaaugcuccuuuuggcacagg
.((((((((((((.((((.(((.(((((..(((.(........))))..))))).))).)))).)))..)))))))))

Structure
c         --   U    C   U     UA   a aua 
 cuuguguUA  AGG GCAU UAG GCAGU  Gug c   g
 |||||||||  ||| |||| ||| |||||  ||| |    
 ggacacggu  ucc cgua auc cguca  uac g   u
-         uu   u    a   c     uc   - aug 


Annotation confidence Not enough data
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Genome context
chr8: 47198092-47198169 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from xtr-mir-18b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-18b

Accession MIMAT0003706
Description Xenopus tropicalis xtr-miR-18b mature miRNA
Sequence 9 - UAAGGUGCAUCUAGUGCAGUUAG - 31
Evidence not_experimental

References