miRBase entry: xtr-mir-221

Stem-loop xtr-mir-221


Accession
MI0004953
Description
Xenopus tropicalis xtr-mir-221 precursor miRNA
Gene family
MIPF0000051; mir-221


Sequence

acccagacuuuggcgugcaccuggcauacaauguagaaaacuguguuugcaaagcaacAGCUACAUUGUCUGCUGGGUUUCaugcugaaugga
..(((...(((((((((.((((((((.(((((((((....((((((((...)))).))))))))))))).))))))))..)))))))))))).

Structure
ac   gac         -c        u         aaaa    -    g 
  cca   uuuggcgug  accuggca acaauguag    cugu guuu  
  |||   |||||||||  |||||||| |||||||||    |||| |||| c
  ggu   aagucguaC  UGGGUCGU UGUUACAUC    GAca cgaa  
-a   ---         UU        C         ----    a    a 


Annotation confidence Not enough data
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Genome context
chr2: 68930805-68930897 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xtr-mir-221
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xtr-miR-221

Accession MIMAT0003700
Description Xenopus tropicalis xtr-miR-221 mature miRNA
Sequence 59 - AGCUACAUUGUCUGCUGGGUUUC - 81
Evidence not_experimental

References