Stem-loop sequence xtr-mir-143

AccessionMI0004937 (change log)
DescriptionXenopus tropicalis miR-143 stem-loop
Gene family MIPF0000094; mir-143
Stem-loop 
   ug      ag   a  g         g      u  -   g 
5'   ucuccc  ccc ag ugcagugcu caucuc gg uca u
     ||||||  ||| || ||||||||| |||||| || |||  
3'   aggggg  ggg uc augucacga guagag cu agu u
   ua      aa   c  g         a      u  g   g
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Xenopus_tropicalis_v9.1; GCA_000004195.3) Overlapping transcripts
chr3: 31806258-31806340 [+]
intergenic
Clustered miRNAs
< 10kb from xtr-mir-143
xtr-mir-143chr3: 31806258-31806340 [+]
xtr-mir-145chr3: 31807219-31807304 [+]
Database links

Mature sequence xtr-miR-143

Accession MIMAT0003686
Sequence

50 -  

ugagaugaagcacuguagcucg

 - 71

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Evidence experimental; Northern [1]
Predicted targets

References

1
PMID:18032731 "Xenopus microRNA genes are predominantly located within introns and are differentially expressed in adult frog tissues via post-transcriptional regulation" Tang GQ, Maxwell ES Genome Res. 18:104-112(2008).