Stem-loop xtr-mir-27c-1

Accession

MI0004916

Description

Xenopus tropicalis xtr-mir-27c-1 precursor miRNA

Gene family

MIPF0000036; mir-27

Sequence

cucuagagaggcaggacuuagcuggcucugugaacaggucuugugugucaaugUUCACAGUGGCUAAGUUCCACcccacugg
..((((.(.((..(((((((((((...(((((((((.(.(......).)..))))))))))))))))))))..)).).))))

Structure

cu    a a  ca           gcu         -g u uu 
  cuag g gg  ggacuuagcug   cugugaaca  g c  g
  |||| | ||  |||||||||||   |||||||||  | |   
  gguc c cC  CUUGAAUCGGU   GACACUUgu  c g  u
--    a c  AC           ---         aa u ug 

Annotation confidence Not enough data

Genome context

chr4: 73605400-73605481 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xtr-mir-27c-1

Mature xtr-miR-27c

• Accession: MIMAT0003675
• Description: Xenopus tropicalis xtr-miR-27c mature miRNA
• Sequence: 54 - UUCACAGUGGCUAAGUUCCAC - 74
• Evidence: not_experimental

References